Dca22727.1
Annotation
- 4-exons
- f-1
- sp|A5BCL1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_010115#unknown#0F0P0C
- sp|Q9ZT94_ARATH#Putative polyprotein of LTR transposon#Arabidopsis thaliana (Mouse-ear cress)#Name=T4I9.16#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold2276)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca22727.1 |
998 |
1070 |
1111 |
3.96 |
73 |
61 |
2e-18
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5BCL1_VITVI |
300 |
372 |
478 |
15.27 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca22727.1 |
989 |
1070 |
1111 |
3.24 |
82 |
44 |
2e-13
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1222 |
1303 |
1401 |
5.85 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2276 |
Augustus |
mRNA |
24043 |
29526 |
. |
+ |
. |
ID=Dca22727.1;Parent=Dca22727 |
| scaffold2276 |
Augustus |
exon |
24043 |
25270 |
. |
+ |
. |
ID=Dca22727.1.exon1;Parent=Dca22727.1 |
| scaffold2276 |
Augustus |
exon |
25419 |
25708 |
. |
+ |
. |
ID=Dca22727.1.exon2;Parent=Dca22727.1 |
| scaffold2276 |
Augustus |
exon |
27570 |
29025 |
. |
+ |
. |
ID=Dca22727.1.exon3;Parent=Dca22727.1 |
| scaffold2276 |
Augustus |
exon |
29165 |
29526 |
. |
+ |
. |
ID=Dca22727.1.exon4;Parent=Dca22727.1 |
