Carnation DB

Dca22799.1

Annotation

5-exons
f-1
sp|F6HET8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_19s0090g01300#unknown#0F0P0C
Os08t0277900-01 Similar to Syntaxin 52 (AtSYP52).
Repeat List (scaffold2282)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22799.1	4	234	234	70.08	231	71	3e-96
Target_name	Start	End	Length	Cov(%)
sp\|F6HET8_VITVI	10	240	240	96.25

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22799.1	3	234	234	62.82	232	64	2e-82
Target_name	Start	End	Length	Cov(%)
Os08t0277900-01	2	232	233	99.14

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2282	Augus-PASA	mRNA	5485	9422	.	-	.	ID=Dca22799.1;Parent=Dca22799
scaffold2282	Augus-PASA	exon	5485	5616	.	-	.	ID=Dca22799.1.exon1;Parent=Dca22799.1
scaffold2282	Augus-PASA	exon	7357	7401	.	-	.	ID=Dca22799.1.exon2;Parent=Dca22799.1
scaffold2282	Augus-PASA	exon	7529	7629	.	-	.	ID=Dca22799.1.exon3;Parent=Dca22799.1
scaffold2282	Augus-PASA	exon	7754	7959	.	-	.	ID=Dca22799.1.exon4;Parent=Dca22799.1
scaffold2282	Augustus	exon	9202	9422	.	-	.	ID=Dca22799.1.exon5;Parent=Dca22799.1