Carnation DB

Dca22805.1

Annotation

5-exons
f-1
sp|A5ARU8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_030566#GO:0004523;GO:0003723;GO:0003964;GO:0015074;GO:0006278#3F2P0C
Os08t0202300-03 Reverse transcriptase domain containing protein.
Repeat List (scaffold2283)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22805.1	111	1070	1071	41.36	960	45	0
Target_name	Start	End	Length	Cov(%)
sp\|A5ARU8_VITVI	1	960	961	99.89

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca22805.1	118	367	1071	7.09	250	31	8e-38
Target_name	Start	End	Length	Cov(%)
Os08t0202300-03	7	255	591	42.13

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2283	Augustus	mRNA	11565	15948	.	+	.	ID=Dca22805.1;Parent=Dca22805
scaffold2283	Augustus	exon	11565	11605	.	+	.	ID=Dca22805.1.exon1;Parent=Dca22805.1
scaffold2283	Augustus	exon	12221	13300	.	+	.	ID=Dca22805.1.exon2;Parent=Dca22805.1
scaffold2283	Augustus	exon	13514	14606	.	+	.	ID=Dca22805.1.exon3;Parent=Dca22805.1
scaffold2283	Augustus	exon	14685	15003	.	+	.	ID=Dca22805.1.exon4;Parent=Dca22805.1
scaffold2283	Augustus	exon	15266	15948	.	+	.	ID=Dca22805.1.exon5;Parent=Dca22805.1