Dca22859.1
Annotation
- 4-exons
- f-1
- sp|A9PK70_9ROSI#Putative uncharacterized protein#Populus trichocarpa x Populus deltoides#unknown#unknown#0F0P0C
- AT4G15802.1 | Symbols: HSBP, AtHSBP | heat shock factor binding protein | chr4:8986864-8988339 REVERSE LENGTH=86
- Repeat List (scaffold229)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca22859.1 |
1 |
76 |
89 |
64.04 |
76 |
75 |
1e-26
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A9PK70_9ROSI |
2 |
78 |
88 |
87.5 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca22859.1 |
1 |
86 |
89 |
64.04 |
86 |
66 |
2e-26
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G15802.1 |
2 |
85 |
86 |
97.67 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold229 |
Augustus |
mRNA |
55724 |
56717 |
. |
+ |
. |
ID=Dca22859.1;Parent=Dca22859 |
| scaffold229 |
Augustus |
exon |
55724 |
55774 |
. |
+ |
. |
ID=Dca22859.1.exon1;Parent=Dca22859.1 |
| scaffold229 |
Augus-PASA |
exon |
56256 |
56279 |
. |
+ |
. |
ID=Dca22859.1.exon2;Parent=Dca22859.1 |
| scaffold229 |
Augus-PASA |
exon |
56371 |
56413 |
. |
+ |
. |
ID=Dca22859.1.exon3;Parent=Dca22859.1 |
| scaffold229 |
Augus-PASA |
exon |
56566 |
56717 |
. |
+ |
. |
ID=Dca22859.1.exon4;Parent=Dca22859.1 |
