Carnation DB

Dca23059.1

Annotation

19-exons
f-1
sp|B9HRI9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_1086748#GO:0003676;GO:0000166#2F0P0C
AT2G21440.1 | Symbols: | RNA-binding (RRM/RBD/RNP motifs) family protein | chr2:9173712-9179065 REVERSE LENGTH=1003
Repeat List (scaffold230)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23059.1	19	984	984	51.93	966	51	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HRI9_POPTR	20	974	974	98.04

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23059.1	1	984	984	48.78	984	46	0
Target_name	Start	End	Length	Cov(%)
AT2G21440.1	1	1003	1003	100

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold230	Augustus	mRNA	64996	71760	.	+	.	ID=Dca23059.1;Parent=Dca23059
scaffold230	Augustus	exon	64996	65155	.	+	.	ID=Dca23059.1.exon1;Parent=Dca23059.1
scaffold230	Augustus	exon	65555	65591	.	+	.	ID=Dca23059.1.exon2;Parent=Dca23059.1
scaffold230	Augustus	exon	66200	66330	.	+	.	ID=Dca23059.1.exon3;Parent=Dca23059.1
scaffold230	Augustus	exon	66470	66568	.	+	.	ID=Dca23059.1.exon4;Parent=Dca23059.1
scaffold230	Augustus	exon	66662	66823	.	+	.	ID=Dca23059.1.exon5;Parent=Dca23059.1
scaffold230	Augustus	exon	66924	67017	.	+	.	ID=Dca23059.1.exon6;Parent=Dca23059.1
scaffold230	Augustus	exon	67333	67466	.	+	.	ID=Dca23059.1.exon7;Parent=Dca23059.1
scaffold230	Augustus	exon	67870	68009	.	+	.	ID=Dca23059.1.exon8;Parent=Dca23059.1
scaffold230	Augustus	exon	68441	68491	.	+	.	ID=Dca23059.1.exon9;Parent=Dca23059.1
scaffold230	Augustus	exon	68596	68678	.	+	.	ID=Dca23059.1.exon10;Parent=Dca23059.1
scaffold230	Augustus	exon	68768	68822	.	+	.	ID=Dca23059.1.exon11;Parent=Dca23059.1
scaffold230	Augustus	exon	68916	69024	.	+	.	ID=Dca23059.1.exon12;Parent=Dca23059.1
scaffold230	Augustus	exon	69273	69457	.	+	.	ID=Dca23059.1.exon13;Parent=Dca23059.1
scaffold230	Augustus	exon	69582	69805	.	+	.	ID=Dca23059.1.exon14;Parent=Dca23059.1
scaffold230	Augustus	exon	69890	70103	.	+	.	ID=Dca23059.1.exon15;Parent=Dca23059.1
scaffold230	Augustus	exon	70226	70296	.	+	.	ID=Dca23059.1.exon16;Parent=Dca23059.1
scaffold230	Augustus	exon	70402	70570	.	+	.	ID=Dca23059.1.exon17;Parent=Dca23059.1
scaffold230	Augustus	exon	70658	70781	.	+	.	ID=Dca23059.1.exon18;Parent=Dca23059.1
scaffold230	Augustus	exon	71048	71760	.	+	.	ID=Dca23059.1.exon19;Parent=Dca23059.1