Dca23388.1
Annotation
- 3-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Os09t0122300-01 Similar to Zinc knuckle family protein.
- Repeat List (scaffold2331)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca23388.1 |
169 |
435 |
488 |
38.52 |
267 |
71 |
1e-106
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
500 |
767 |
1717 |
15.6 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca23388.1 |
143 |
263 |
488 |
8.81 |
121 |
33 |
6e-13
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
58 |
189 |
192 |
68.75 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2331 |
Augustus |
mRNA |
35990 |
38345 |
. |
+ |
. |
ID=Dca23388.1;Parent=Dca23388 |
| scaffold2331 |
Augustus |
exon |
35990 |
36166 |
. |
+ |
. |
ID=Dca23388.1.exon1;Parent=Dca23388.1 |
| scaffold2331 |
Augustus |
exon |
36600 |
36777 |
. |
+ |
. |
ID=Dca23388.1.exon2;Parent=Dca23388.1 |
| scaffold2331 |
Augustus |
exon |
37234 |
38345 |
. |
+ |
. |
ID=Dca23388.1.exon3;Parent=Dca23388.1 |
