Dca2353.1
Annotation
- 4-exons
- f-1
- sp|Q6ATH4_ORYSJ#Putative polyprotein#Oryza sativa subsp japonica (Rice)#Name=OSJNBa0093E24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold108)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2353.1 |
16 |
219 |
1456 |
4.39 |
204 |
32 |
4e-26
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q6ATH4_ORYSJ |
25 |
222 |
1480 |
13.37 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2353.1 |
379 |
1417 |
1456 |
22.8 |
1039 |
32 |
4e-155
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
379 |
1399 |
1401 |
72.87 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold108 |
Augustus |
mRNA |
134149 |
139663 |
. |
+ |
. |
ID=Dca2353.1;Parent=Dca2353 |
| scaffold108 |
Augustus |
exon |
134149 |
135328 |
. |
+ |
. |
ID=Dca2353.1.exon1;Parent=Dca2353.1 |
| scaffold108 |
Augustus |
exon |
135455 |
138494 |
. |
+ |
. |
ID=Dca2353.1.exon2;Parent=Dca2353.1 |
| scaffold108 |
Augustus |
exon |
139412 |
139521 |
. |
+ |
. |
ID=Dca2353.1.exon3;Parent=Dca2353.1 |
| scaffold108 |
Augustus |
exon |
139623 |
139663 |
. |
+ |
. |
ID=Dca2353.1.exon4;Parent=Dca2353.1 |
