Dca23763.1
Annotation
- 3-exons
- f-1
- sp|E5GBG5_CUCME#Ty1-copia retrotransposon protein#Cucumis melo subsp melo#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold2371)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca23763.1 |
2 |
168 |
289 |
32.52 |
167 |
53 |
5e-41
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E5GBG5_CUCME |
303 |
476 |
1038 |
16.76 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca23763.1 |
155 |
272 |
289 |
15.22 |
118 |
37 |
1e-18
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
627 |
744 |
1428 |
8.26 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2371 |
Augustus |
mRNA |
25336 |
27035 |
. |
- |
. |
ID=Dca23763.1;Parent=Dca23763 |
| scaffold2371 |
Augustus |
exon |
25336 |
25707 |
. |
- |
. |
ID=Dca23763.1.exon1;Parent=Dca23763.1 |
| scaffold2371 |
Augustus |
exon |
26109 |
26203 |
. |
- |
. |
ID=Dca23763.1.exon2;Parent=Dca23763.1 |
| scaffold2371 |
Augustus |
exon |
26633 |
27035 |
. |
- |
. |
ID=Dca23763.1.exon3;Parent=Dca23763.1 |
