Carnation DB

Dca23846.1

Annotation

6-exons
f-1
sp|D7U1X8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_14s0128g00160#GO:0005524;GO:0004674#2F0P0C
Os05t0398800-01 Similar to Serine/threonine-protein kinase PBS1 (EC 2.7.1.37) (AvrPphB susceptible protein 1).
Repeat List (scaffold238)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23846.1	22	432	438	65.75	411	70	5e-162
Target_name	Start	End	Length	Cov(%)
sp\|D7U1X8_VITVI	29	438	438	93.6

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23846.1	100	412	438	52.28	313	73	7e-136
Target_name	Start	End	Length	Cov(%)
Os05t0398800-01	130	447	492	64.63

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold238	Augus-PASA	mRNA	152157	154654	.	+	.	ID=Dca23846.1;Parent=Dca23846
scaffold238	Augus-PASA	exon	152157	152442	.	+	.	ID=Dca23846.1.exon1;Parent=Dca23846.1
scaffold238	Augus-PASA	exon	152545	152789	.	+	.	ID=Dca23846.1.exon2;Parent=Dca23846.1
scaffold238	Augus-PASA	exon	153458	153843	.	+	.	ID=Dca23846.1.exon3;Parent=Dca23846.1
scaffold238	Augus-PASA	exon	154070	154202	.	+	.	ID=Dca23846.1.exon4;Parent=Dca23846.1
scaffold238	Augus-PASA	exon	154294	154383	.	+	.	ID=Dca23846.1.exon5;Parent=Dca23846.1
scaffold238	Augus-PASA	exon	154478	154654	.	+	.	ID=Dca23846.1.exon6;Parent=Dca23846.1