Carnation DB

Dca23858.1

Annotation

6-exons
f-1
sp|F6GWG2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_05s0029g00130#GO:0005622;GO:0003677#1F0P1C
AT1G04880.1 | Symbols: | HMG (high mobility group) box protein with ARID/BRIGHT DNA-binding domain | chr1:1376106-1378264 REVERSE LENGTH=448
Repeat List (scaffold2381)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23858.1	15	355	433	48.96	341	61	3e-119
Target_name	Start	End	Length	Cov(%)
sp\|F6GWG2_VITVI	40	389	482	72.61

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23858.1	22	354	433	47.34	333	60	6e-106
Target_name	Start	End	Length	Cov(%)
AT1G04880.1	20	361	448	76.33

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2381	Augustus	mRNA	19250	22384	.	+	.	ID=Dca23858.1;Parent=Dca23858
scaffold2381	Augustus	exon	19250	19407	.	+	.	ID=Dca23858.1.exon1;Parent=Dca23858.1
scaffold2381	Augustus	exon	20202	20280	.	+	.	ID=Dca23858.1.exon2;Parent=Dca23858.1
scaffold2381	Augustus	exon	20562	20724	.	+	.	ID=Dca23858.1.exon3;Parent=Dca23858.1
scaffold2381	Augustus	exon	20821	20937	.	+	.	ID=Dca23858.1.exon4;Parent=Dca23858.1
scaffold2381	Augustus	exon	21295	21680	.	+	.	ID=Dca23858.1.exon5;Parent=Dca23858.1
scaffold2381	Augustus	exon	21986	22384	.	+	.	ID=Dca23858.1.exon6;Parent=Dca23858.1