Carnation DB

Dca23889.1

Annotation

6-exons
f-1
sp|B9MUH4_POPTR#Autophagy-related protein 3#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_836380#GO:0005737;GO:0006914;GO:0015031#0F2P1C
Repeat List (scaffold2385)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23889.1	6	176	176	85.22	171	88	4e-86
Target_name	Start	End	Length	Cov(%)
sp\|B9MUH4_POPTR	146	315	315	53.96

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23889.1	3	176	176	84.65	174	86	2e-86
Target_name	Start	End	Length	Cov(%)
AT5G61500.1	141	313	313	55.27

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2385	Augustus	mRNA	2508	8525	.	-	.	ID=Dca23889.1;Parent=Dca23889
scaffold2385	Augustus	exon	2508	2604	.	-	.	ID=Dca23889.1.exon1;Parent=Dca23889.1
scaffold2385	Augustus	exon	2803	2930	.	-	.	ID=Dca23889.1.exon2;Parent=Dca23889.1
scaffold2385	Augustus	exon	3378	3443	.	-	.	ID=Dca23889.1.exon3;Parent=Dca23889.1
scaffold2385	Augustus	exon	3713	3764	.	-	.	ID=Dca23889.1.exon4;Parent=Dca23889.1
scaffold2385	Augustus	exon	7952	8037	.	-	.	ID=Dca23889.1.exon5;Parent=Dca23889.1
scaffold2385	Augustus	exon	8424	8525	.	-	.	ID=Dca23889.1.exon6;Parent=Dca23889.1