Dca23924.1
Annotation
- 3-exons
- f-1
- sp|D7MC61_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_491719#GO:0005576#0F0P1C
- AT4G30320.1 | Symbols: | CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein | chr4:14835833-14836318 FORWARD LENGTH=161
- Repeat List (scaffold239)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca23924.1 |
35 |
157 |
379 |
18.73 |
123 |
58 |
1e-38
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7MC61_ARALL |
1 |
122 |
131 |
93.12 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca23924.1 |
13 |
158 |
379 |
19.52 |
146 |
51 |
5e-39
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G30320.1 |
9 |
153 |
161 |
90.06 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold239 |
Augustus |
mRNA |
3069 |
5835 |
. |
- |
. |
ID=Dca23924.1;Parent=Dca23924 |
| scaffold239 |
Augustus |
exon |
3069 |
3667 |
. |
- |
. |
ID=Dca23924.1.exon1;Parent=Dca23924.1 |
| scaffold239 |
Augustus |
exon |
3932 |
4000 |
. |
- |
. |
ID=Dca23924.1.exon2;Parent=Dca23924.1 |
| scaffold239 |
Augustus |
exon |
5364 |
5835 |
. |
- |
. |
ID=Dca23924.1.exon3;Parent=Dca23924.1 |
