Carnation DB

Dca23937.1

Annotation

6-exons
f-1
sp|B9N2Z1_POPTR#Porin/voltage-dependent anion-selective channel protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_580465#GO:0005741;GO:0008308#1F0P1C
Repeat List (scaffold239)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23937.1	3	272	272	67.27	270	68	5e-106
Target_name	Start	End	Length	Cov(%)
sp\|B9N2Z1_POPTR	5	275	275	98.54

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca23937.1	2	272	272	57.72	271	58	7e-92
Target_name	Start	End	Length	Cov(%)
AT5G57490.1	4	274	274	98.9

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold239	Augus-PASA	mRNA	111079	114904	.	-	.	ID=Dca23937.1;Parent=Dca23937
scaffold239	Augus-PASA	exon	111079	111379	.	-	.	ID=Dca23937.1.exon1;Parent=Dca23937.1
scaffold239	Augus-PASA	exon	111811	112019	.	-	.	ID=Dca23937.1.exon2;Parent=Dca23937.1
scaffold239	Augus-PASA	exon	112790	112876	.	-	.	ID=Dca23937.1.exon3;Parent=Dca23937.1
scaffold239	Augus-PASA	exon	113055	113165	.	-	.	ID=Dca23937.1.exon4;Parent=Dca23937.1
scaffold239	Augus-PASA	exon	113973	114040	.	-	.	ID=Dca23937.1.exon5;Parent=Dca23937.1
scaffold239	Augustus	exon	114862	114904	.	-	.	ID=Dca23937.1.exon6;Parent=Dca23937.1