Carnation DB

Dca24057.1

Annotation

10-exons
f-1
sp|B9ILM8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_261857#GO:0000166#1F0P0C
Os01t0227100-01 Glucose/ribitol dehydrogenase family protein.
Repeat List (scaffold24)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24057.1	83	495	495	68.68	413	82	0
Target_name	Start	End	Length	Cov(%)
sp\|B9ILM8_POPTR	23	436	436	94.95

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24057.1	84	495	495	65.05	412	78	0
Target_name	Start	End	Length	Cov(%)
Os01t0227100-01	90	504	505	82.17

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold24	Augus-PASA	mRNA	290709	293620	.	+	.	ID=Dca24057.1;Parent=Dca24057
scaffold24	Augus-PASA	exon	290709	291008	.	+	.	ID=Dca24057.1.exon1;Parent=Dca24057.1
scaffold24	Augus-PASA	exon	291726	291804	.	+	.	ID=Dca24057.1.exon2;Parent=Dca24057.1
scaffold24	Augus-PASA	exon	291882	292017	.	+	.	ID=Dca24057.1.exon3;Parent=Dca24057.1
scaffold24	Augus-PASA	exon	292095	292169	.	+	.	ID=Dca24057.1.exon4;Parent=Dca24057.1
scaffold24	Augus-PASA	exon	292262	292445	.	+	.	ID=Dca24057.1.exon5;Parent=Dca24057.1
scaffold24	Augus-PASA	exon	292539	292607	.	+	.	ID=Dca24057.1.exon6;Parent=Dca24057.1
scaffold24	Augus-PASA	exon	292687	292826	.	+	.	ID=Dca24057.1.exon7;Parent=Dca24057.1
scaffold24	Augus-PASA	exon	292915	293037	.	+	.	ID=Dca24057.1.exon8;Parent=Dca24057.1
scaffold24	Augus-PASA	exon	293154	293346	.	+	.	ID=Dca24057.1.exon9;Parent=Dca24057.1
scaffold24	Augus-PASA	exon	293432	293620	.	+	.	ID=Dca24057.1.exon10;Parent=Dca24057.1