Dca24320.1
Annotation
- 3-exons
- f-1
- sp|A2YKT5_ORYSI#Putative uncharacterized protein#Oryza sativa subsp indica (Rice)#ORFNames=OsI_25828#GO:0016021;GO:0005886#0F0P2C
- Os07t0442900-01 Uncharacterised protein family UPF0497, trans-membrane plant subgroup domain containing protein.
- Repeat List (scaffold2419)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca24320.1 |
22 |
191 |
195 |
46.66 |
170 |
53 |
4e-42
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2YKT5_ORYSI |
36 |
207 |
209 |
82.29 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca24320.1 |
23 |
191 |
195 |
46.66 |
169 |
54 |
8e-43
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os07t0442900-01 |
35 |
205 |
208 |
82.21 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2419 |
Augus-PASA |
mRNA |
19477 |
20269 |
. |
- |
. |
ID=Dca24320.1;Parent=Dca24320 |
| scaffold2419 |
Augus-PASA |
exon |
19477 |
19704 |
. |
- |
. |
ID=Dca24320.1.exon1;Parent=Dca24320.1 |
| scaffold2419 |
Augus-PASA |
exon |
19824 |
19950 |
. |
- |
. |
ID=Dca24320.1.exon2;Parent=Dca24320.1 |
| scaffold2419 |
Augus-PASA |
exon |
20037 |
20269 |
. |
- |
. |
ID=Dca24320.1.exon3;Parent=Dca24320.1 |
