Carnation DB

Dca24347.1

Annotation

6-exons
f-1
sp|D7KKT3_ARALL#ATSWI3C#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_472410#GO:0005634;GO:0003677;GO:0006355#1F1P1C
Repeat List (scaffold242)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24347.1	33	285	285	50.17	253	57	1e-76
Target_name	Start	End	Length	Cov(%)
sp\|D7KKT3_ARALL	357	610	798	31.82

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24347.1	33	285	285	48.42	253	55	3e-75
Target_name	Start	End	Length	Cov(%)
AT1G21700.1	363	616	807	31.47

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold242	Augustus	mRNA	200115	204651	.	+	.	ID=Dca24347.1;Parent=Dca24347
scaffold242	Augustus	exon	200115	200210	.	+	.	ID=Dca24347.1.exon1;Parent=Dca24347.1
scaffold242	Augustus	exon	200340	200691	.	+	.	ID=Dca24347.1.exon2;Parent=Dca24347.1
scaffold242	Augustus	exon	200822	200895	.	+	.	ID=Dca24347.1.exon3;Parent=Dca24347.1
scaffold242	Augustus	exon	203625	203728	.	+	.	ID=Dca24347.1.exon4;Parent=Dca24347.1
scaffold242	Augustus	exon	204299	204351	.	+	.	ID=Dca24347.1.exon5;Parent=Dca24347.1
scaffold242	Augustus	exon	204476	204651	.	+	.	ID=Dca24347.1.exon6;Parent=Dca24347.1