Carnation DB

Dca24389.1

Annotation

9-exons
f-1
sp|B9H0G4_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_818055#GO:0005524;GO:0004674#2F0P0C
sp|B9SVJ9_RICCO#5-AMP-activated protein kinase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0538120#GO:0005524;GO:0004683#2F0P0C
Repeat List (scaffold2425)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24389.1	36	106	363	17.63	71	91	8e-32
Target_name	Start	End	Length	Cov(%)
sp\|B9H0G4_POPTR	280	350	515	13.78

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24389.1	36	123	363	17.35	88	72	9e-30
Target_name	Start	End	Length	Cov(%)
AT3G01090.2	303	383	535	15.14

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2425	Augustus	mRNA	9096	14921	.	+	.	ID=Dca24389.1;Parent=Dca24389
scaffold2425	Augustus	exon	9096	9201	.	+	.	ID=Dca24389.1.exon1;Parent=Dca24389.1
scaffold2425	Augustus	exon	10890	10927	.	+	.	ID=Dca24389.1.exon2;Parent=Dca24389.1
scaffold2425	Augustus	exon	11051	11140	.	+	.	ID=Dca24389.1.exon3;Parent=Dca24389.1
scaffold2425	Augustus	exon	11216	11299	.	+	.	ID=Dca24389.1.exon4;Parent=Dca24389.1
scaffold2425	Augustus	exon	11595	11619	.	+	.	ID=Dca24389.1.exon5;Parent=Dca24389.1
scaffold2425	Augustus	exon	12527	12586	.	+	.	ID=Dca24389.1.exon6;Parent=Dca24389.1
scaffold2425	Augustus	exon	12688	12869	.	+	.	ID=Dca24389.1.exon7;Parent=Dca24389.1
scaffold2425	Augustus	exon	14330	14747	.	+	.	ID=Dca24389.1.exon8;Parent=Dca24389.1
scaffold2425	Augustus	exon	14833	14921	.	+	.	ID=Dca24389.1.exon9;Parent=Dca24389.1