Carnation DB

Dca24408.1

Annotation

10-exons
f-1
sp|B9I3B2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_834331#GO:0016788;GO:0006629#1F1P0C
AT5G62930.1 | Symbols: | SGNH hydrolase-type esterase superfamily protein | chr5:25254912-25256357 FORWARD LENGTH=242
Repeat List (scaffold2427)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24408.1	183	426	426	32.15	244	57	3e-73
Target_name	Start	End	Length	Cov(%)
sp\|B9I3B2_POPTR	10	242	242	96.28

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24408.1	249	426	426	28.4	178	68	3e-71
Target_name	Start	End	Length	Cov(%)
AT5G62930.1	65	242	242	73.55

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2427	Augus-PASA	mRNA	26060	30822	.	+	.	ID=Dca24408.1;Parent=Dca24408
scaffold2427	Augus-PASA	exon	26060	26167	.	+	.	ID=Dca24408.1.exon1;Parent=Dca24408.1
scaffold2427	Augus-PASA	exon	26325	26402	.	+	.	ID=Dca24408.1.exon2;Parent=Dca24408.1
scaffold2427	Augus-PASA	exon	26968	27111	.	+	.	ID=Dca24408.1.exon3;Parent=Dca24408.1
scaffold2427	Augus-PASA	exon	27600	27676	.	+	.	ID=Dca24408.1.exon4;Parent=Dca24408.1
scaffold2427	Augus-PASA	exon	27800	27964	.	+	.	ID=Dca24408.1.exon5;Parent=Dca24408.1
scaffold2427	Augustus	exon	28231	28384	.	+	.	ID=Dca24408.1.exon6;Parent=Dca24408.1
scaffold2427	Augustus	exon	29408	29551	.	+	.	ID=Dca24408.1.exon7;Parent=Dca24408.1
scaffold2427	Augustus	exon	30034	30110	.	+	.	ID=Dca24408.1.exon8;Parent=Dca24408.1
scaffold2427	Augustus	exon	30234	30398	.	+	.	ID=Dca24408.1.exon9;Parent=Dca24408.1
scaffold2427	Augustus	exon	30654	30822	.	+	.	ID=Dca24408.1.exon10;Parent=Dca24408.1