Carnation DB

Dca24428.1

Annotation

9-exons
f-1
sp|D7T789_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_05s0020g04720#GO:0016020;GO:0046873#1F0P1C
sp|B9HKE1_POPTR#Magnesium transporter#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_766426#GO:0016020#0F0P1C
Repeat List (scaffold243)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24428.1	1	347	365	74.52	347	75	1e-134
Target_name	Start	End	Length	Cov(%)
sp\|D7T789_VITVI	1	363	389	93.31

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24428.1	1	357	365	67.94	357	67	2e-128
Target_name	Start	End	Length	Cov(%)
AT5G09690.2	12	382	397	93.45

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold243	Augustus	mRNA	3233	7657	.	+	.	ID=Dca24428.1;Parent=Dca24428
scaffold243	Augustus	exon	3233	3484	.	+	.	ID=Dca24428.1.exon1;Parent=Dca24428.1
scaffold243	Augustus	exon	3593	3622	.	+	.	ID=Dca24428.1.exon2;Parent=Dca24428.1
scaffold243	Augustus	exon	3932	4058	.	+	.	ID=Dca24428.1.exon3;Parent=Dca24428.1
scaffold243	Augustus	exon	4331	4452	.	+	.	ID=Dca24428.1.exon4;Parent=Dca24428.1
scaffold243	Augustus	exon	4872	4946	.	+	.	ID=Dca24428.1.exon5;Parent=Dca24428.1
scaffold243	Augustus	exon	6429	6653	.	+	.	ID=Dca24428.1.exon6;Parent=Dca24428.1
scaffold243	Augustus	exon	6788	6832	.	+	.	ID=Dca24428.1.exon7;Parent=Dca24428.1
scaffold243	Augustus	exon	7333	7377	.	+	.	ID=Dca24428.1.exon8;Parent=Dca24428.1
scaffold243	Augustus	exon	7481	7657	.	+	.	ID=Dca24428.1.exon9;Parent=Dca24428.1