Dca24614.1
Annotation
- 3-exons
- f-1
- sp|D3IVT9_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold2448)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca24614.1 |
6 |
50 |
50 |
70 |
45 |
77 |
4e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVT9_9POAL |
1084 |
1129 |
1313 |
3.5 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca24614.1 |
2 |
390 |
411 |
30.65 |
389 |
31 |
1e-41
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
976 |
1378 |
1401 |
28.76 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2448 |
Augustus |
mRNA |
6045 |
11369 |
. |
+ |
. |
ID=Dca24614.1;Parent=Dca24614 |
| scaffold2448 |
Augustus |
exon |
6045 |
6203 |
. |
+ |
. |
ID=Dca24614.1.exon1;Parent=Dca24614.1 |
| scaffold2448 |
Augustus |
exon |
6276 |
6769 |
. |
+ |
. |
ID=Dca24614.1.exon2;Parent=Dca24614.1 |
| scaffold2448 |
Augustus |
exon |
10787 |
11369 |
. |
+ |
. |
ID=Dca24614.1.exon3;Parent=Dca24614.1 |
