Carnation DB

Dca24617.1

Annotation

8-exons
f-1
sp|F6GXZ1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0058g00880#GO:0005622;GO:0006886#0F1P1C
sp|B9T6F7_RICCO#Protein transporter, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0665150#GO:0005622;GO:0006886#0F1P1C
Repeat List (scaffold2448)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24617.1	16	640	640	39.21	625	37	7e-83
Target_name	Start	End	Length	Cov(%)
sp\|F6GXZ1_VITVI	16	625	625	97.6

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24617.1	525	640	640	6.09	116	32	3e-08
Target_name	Start	End	Length	Cov(%)
AT2G38410.1	553	669	671	17.43

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2448	Augustus	mRNA	25385	29975	.	+	.	ID=Dca24617.1;Parent=Dca24617
scaffold2448	Augustus	exon	25385	25524	.	+	.	ID=Dca24617.1.exon1;Parent=Dca24617.1
scaffold2448	Augustus	exon	27094	27286	.	+	.	ID=Dca24617.1.exon2;Parent=Dca24617.1
scaffold2448	Augustus	exon	27601	27761	.	+	.	ID=Dca24617.1.exon3;Parent=Dca24617.1
scaffold2448	Augustus	exon	27864	27945	.	+	.	ID=Dca24617.1.exon4;Parent=Dca24617.1
scaffold2448	Augustus	exon	28029	28114	.	+	.	ID=Dca24617.1.exon5;Parent=Dca24617.1
scaffold2448	Augustus	exon	28212	28499	.	+	.	ID=Dca24617.1.exon6;Parent=Dca24617.1
scaffold2448	Augustus	exon	28783	29035	.	+	.	ID=Dca24617.1.exon7;Parent=Dca24617.1
scaffold2448	Augustus	exon	29256	29975	.	+	.	ID=Dca24617.1.exon8;Parent=Dca24617.1