Carnation DB

Dca24725.1

Annotation

7-exons
f-1
sp|D7L007_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_479637#GO:0043565;GO:0003700;GO:0008270#3F0P0C
AT3G21175.1 | Symbols: ZML1, TIFY2B, GATA24 | ZIM-like 1 | chr3:7422832-7424598 FORWARD LENGTH=297
Repeat List (scaffold246)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24725.1	1	289	290	59.31	289	57	7e-86
Target_name	Start	End	Length	Cov(%)
sp\|D7L007_ARALL	1	296	297	99.66

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca24725.1	1	289	290	57.93	289	56	2e-86
Target_name	Start	End	Length	Cov(%)
AT3G21175.1	1	296	297	99.66

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold246	Augus-PASA	mRNA	57173	60710	.	-	.	ID=Dca24725.1;Parent=Dca24725
scaffold246	Augus-PASA	exon	57173	57238	.	-	.	ID=Dca24725.1.exon1;Parent=Dca24725.1
scaffold246	Augus-PASA	exon	57342	57413	.	-	.	ID=Dca24725.1.exon2;Parent=Dca24725.1
scaffold246	Augus-PASA	exon	58018	58123	.	-	.	ID=Dca24725.1.exon3;Parent=Dca24725.1
scaffold246	Augus-PASA	exon	58638	58769	.	-	.	ID=Dca24725.1.exon4;Parent=Dca24725.1
scaffold246	Augus-PASA	exon	59097	59236	.	-	.	ID=Dca24725.1.exon5;Parent=Dca24725.1
scaffold246	Augustus	exon	59314	59400	.	-	.	ID=Dca24725.1.exon6;Parent=Dca24725.1
scaffold246	Augustus	exon	60441	60710	.	-	.	ID=Dca24725.1.exon7;Parent=Dca24725.1