Dca24794.1
Annotation
- 2-exons
- f-2
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold24668)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca24794.1 |
1 |
146 |
154 |
54.54 |
146 |
43 |
2e-36
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
229 |
424 |
964 |
20.33 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca24794.1 |
3 |
97 |
154 |
30.51 |
95 |
47 |
7e-20
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
645 |
746 |
1428 |
7.14 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold24668 |
Augustus |
mRNA |
801 |
1391 |
. |
+ |
. |
ID=Dca24794.1;Parent=Dca24794 |
| scaffold24668 |
Augustus |
exon |
801 |
1094 |
. |
+ |
. |
ID=Dca24794.1.exon1;Parent=Dca24794.1 |
| scaffold24668 |
Augustus |
exon |
1220 |
1391 |
. |
+ |
. |
ID=Dca24794.1.exon2;Parent=Dca24794.1 |
