Carnation DB

Dca25031.1

Annotation

10-exons
f-1
sp|B9IA88_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_572889#GO:0004190;GO:0006508#1F1P0C
sp|B9RPK3_RICCO#Aspartic proteinase nepenthesin-1, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1378890#GO:0004190;GO:0006508#1F1P0C
Repeat List (scaffold249)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25031.1	1	474	488	60.24	474	62	4e-176
Target_name	Start	End	Length	Cov(%)
sp\|B9IA88_POPTR	3	470	485	96.49

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25031.1	28	465	488	56.76	438	63	3e-169
Target_name	Start	End	Length	Cov(%)
AT1G05840.1	25	463	485	90.51

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold249	Augus-PASA	mRNA	51242	57939	.	-	.	ID=Dca25031.1;Parent=Dca25031
scaffold249	Augus-PASA	exon	51242	51390	.	-	.	ID=Dca25031.1.exon1;Parent=Dca25031.1
scaffold249	Augus-PASA	exon	52040	52111	.	-	.	ID=Dca25031.1.exon2;Parent=Dca25031.1
scaffold249	Augus-PASA	exon	52462	52537	.	-	.	ID=Dca25031.1.exon3;Parent=Dca25031.1
scaffold249	Augus-PASA	exon	53062	53149	.	-	.	ID=Dca25031.1.exon4;Parent=Dca25031.1
scaffold249	Augus-PASA	exon	53387	53460	.	-	.	ID=Dca25031.1.exon5;Parent=Dca25031.1
scaffold249	Augus-PASA	exon	53546	53708	.	-	.	ID=Dca25031.1.exon6;Parent=Dca25031.1
scaffold249	Augustus	exon	54804	55034	.	-	.	ID=Dca25031.1.exon7;Parent=Dca25031.1
scaffold249	Augustus	exon	56019	56266	.	-	.	ID=Dca25031.1.exon8;Parent=Dca25031.1
scaffold249	Augustus	exon	56749	56878	.	-	.	ID=Dca25031.1.exon9;Parent=Dca25031.1
scaffold249	Augustus	exon	57704	57939	.	-	.	ID=Dca25031.1.exon10;Parent=Dca25031.1