Carnation DB

Dca25044.1

Annotation

6-exons
f-1
sp|C6TMI2_SOYBN#Putative uncharacterized protein#Glycine max (Soybean) (Glycine hispida)#unknown#GO:0005524;GO:0004674#2F0P0C
Os05t0110900-01 Similar to Protein kinase APK1B, chloroplast precursor (EC 2.7.1.-).
Repeat List (scaffold249)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25044.1	1	361	413	66.58	361	77	2e-168
Target_name	Start	End	Length	Cov(%)
sp\|C6TMI2_SOYBN	1	361	422	85.54

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25044.1	1	370	413	63.92	370	72	7e-158
Target_name	Start	End	Length	Cov(%)
Os05t0110900-01	1	366	396	92.42

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold249	Augus-PASA	mRNA	143990	146831	.	-	.	ID=Dca25044.1;Parent=Dca25044
scaffold249	Augus-PASA	exon	143990	144450	.	-	.	ID=Dca25044.1.exon1;Parent=Dca25044.1
scaffold249	Augus-PASA	exon	144906	145029	.	-	.	ID=Dca25044.1.exon2;Parent=Dca25044.1
scaffold249	Augus-PASA	exon	145115	145257	.	-	.	ID=Dca25044.1.exon3;Parent=Dca25044.1
scaffold249	Augus-PASA	exon	145345	145480	.	-	.	ID=Dca25044.1.exon4;Parent=Dca25044.1
scaffold249	Augus-PASA	exon	145864	146189	.	-	.	ID=Dca25044.1.exon5;Parent=Dca25044.1
scaffold249	Augus-PASA	exon	146780	146831	.	-	.	ID=Dca25044.1.exon6;Parent=Dca25044.1