Carnation DB

Dca25156.1

Annotation

7-exons
f-1
sp|B9IK01_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_778532#GO:0003723#1F0P0C
AT5G15270.2 | Symbols: | RNA-binding KH domain-containing protein | chr5:4958738-4960947 FORWARD LENGTH=548
Repeat List (scaffold25)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25156.1	1	530	615	55.77	530	64	0
Target_name	Start	End	Length	Cov(%)
sp\|B9IK01_POPTR	1	531	531	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25156.1	4	518	615	52.03	515	62	1e-172
Target_name	Start	End	Length	Cov(%)
AT5G15270.2	11	521	548	93.24

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold25	Augustus	mRNA	256960	260693	.	-	.	ID=Dca25156.1;Parent=Dca25156
scaffold25	Augustus	exon	256960	257206	.	-	.	ID=Dca25156.1.exon1;Parent=Dca25156.1
scaffold25	Augustus	exon	257413	257424	.	-	.	ID=Dca25156.1.exon2;Parent=Dca25156.1
scaffold25	Augustus	exon	257714	257781	.	-	.	ID=Dca25156.1.exon3;Parent=Dca25156.1
scaffold25	Augustus	exon	258125	258382	.	-	.	ID=Dca25156.1.exon4;Parent=Dca25156.1
scaffold25	Augus-PASA	exon	258505	258762	.	-	.	ID=Dca25156.1.exon5;Parent=Dca25156.1
scaffold25	Augus-PASA	exon	258852	259277	.	-	.	ID=Dca25156.1.exon6;Parent=Dca25156.1
scaffold25	Augustus	exon	260115	260693	.	-	.	ID=Dca25156.1.exon7;Parent=Dca25156.1