Dca25180.1
Annotation
- 4-exons
- f-1
- sp|B9IJR3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_835680#GO:0016020;GO:0008375#1F0P1C
- sp|B9RUK1_RICCO#Acetylglucosaminyltransferase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0853740#GO:0016020;GO:0008375;GO:0030158#2F0P1C
- Repeat List (scaffold25)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca25180.1 |
5 |
392 |
392 |
63.26 |
388 |
61 |
6e-143
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9IJR3_POPTR |
20 |
428 |
428 |
95.56 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca25180.1 |
44 |
392 |
392 |
57.9 |
349 |
66 |
2e-138
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G15050.1 |
87 |
434 |
434 |
80.18 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold25 |
Augustus |
mRNA |
468377 |
470219 |
. |
+ |
. |
ID=Dca25180.1;Parent=Dca25180 |
| scaffold25 |
Augustus |
exon |
468377 |
468845 |
. |
+ |
. |
ID=Dca25180.1.exon1;Parent=Dca25180.1 |
| scaffold25 |
Augustus |
exon |
469238 |
469313 |
. |
+ |
. |
ID=Dca25180.1.exon2;Parent=Dca25180.1 |
| scaffold25 |
Augustus |
exon |
469401 |
469516 |
. |
+ |
. |
ID=Dca25180.1.exon3;Parent=Dca25180.1 |
| scaffold25 |
Augustus |
exon |
469702 |
470219 |
. |
+ |
. |
ID=Dca25180.1.exon4;Parent=Dca25180.1 |
