Carnation DB

Dca25209.1

Annotation

5-exons
f-1
sp|B9IQU5_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_780752#unknown#0F0P0C
AT2G31730.1 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr2:13487783-13488593 REVERSE LENGTH=153
Repeat List (scaffold250)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25209.1	3	132	134	65.67	130	68	3e-45
Target_name	Start	End	Length	Cov(%)
sp\|B9IQU5_POPTR	2	132	142	92.25

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25209.1	1	129	134	58.95	129	62	1e-40
Target_name	Start	End	Length	Cov(%)
AT2G31730.1	11	136	153	82.35

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold250	Augustus	mRNA	122874	124380	.	+	.	ID=Dca25209.1;Parent=Dca25209
scaffold250	Augustus	exon	122874	122969	.	+	.	ID=Dca25209.1.exon1;Parent=Dca25209.1
scaffold250	Augus-PASA	exon	123322	123387	.	+	.	ID=Dca25209.1.exon2;Parent=Dca25209.1
scaffold250	Augus-PASA	exon	123497	123562	.	+	.	ID=Dca25209.1.exon3;Parent=Dca25209.1
scaffold250	Augus-PASA	exon	123945	123992	.	+	.	ID=Dca25209.1.exon4;Parent=Dca25209.1
scaffold250	Augus-PASA	exon	124252	124380	.	+	.	ID=Dca25209.1.exon5;Parent=Dca25209.1