Carnation DB

Dca25216.1

Annotation

5-exons
f-1
sp|B9HGJ4_POPTR#Putative uncharacterized protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_216196#GO:0005634;GO:0004402;GO:0003712;GO:0008270;GO:0006355#3F1P1C
Os01t0893400-02 Zinc finger, TAZ-type domain containing protein.
Repeat List (scaffold250)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25216.1	20	362	375	56	343	62	1e-124
Target_name	Start	End	Length	Cov(%)
sp\|B9HGJ4_POPTR	4	346	355	96.61

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25216.1	2	364	375	49.33	363	51	3e-107
Target_name	Start	End	Length	Cov(%)
Os01t0893400-02	36	398	414	87.68

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold250	Augus-PASA	mRNA	169398	170925	.	-	.	ID=Dca25216.1;Parent=Dca25216
scaffold250	Augus-PASA	exon	169398	169524	.	-	.	ID=Dca25216.1.exon1;Parent=Dca25216.1
scaffold250	Augus-PASA	exon	169660	169973	.	-	.	ID=Dca25216.1.exon2;Parent=Dca25216.1
scaffold250	Augus-PASA	exon	170059	170365	.	-	.	ID=Dca25216.1.exon3;Parent=Dca25216.1
scaffold250	Augus-PASA	exon	170454	170584	.	-	.	ID=Dca25216.1.exon4;Parent=Dca25216.1
scaffold250	Augustus	exon	170677	170925	.	-	.	ID=Dca25216.1.exon5;Parent=Dca25216.1