Dca25226.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold2501)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca25226.1 |
1 |
171 |
171 |
65.49 |
171 |
65 |
1e-58
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|G9FIF2_BETVU |
904 |
1076 |
1553 |
11.13 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca25226.1 |
1 |
100 |
171 |
21.05 |
100 |
36 |
4e-13
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
897 |
996 |
1539 |
6.49 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2501 |
Augustus |
mRNA |
7354 |
8981 |
. |
- |
. |
ID=Dca25226.1;Parent=Dca25226 |
| scaffold2501 |
Augustus |
exon |
7354 |
8267 |
. |
- |
. |
ID=Dca25226.1.exon1;Parent=Dca25226.1 |
| scaffold2501 |
Augustus |
exon |
8360 |
8981 |
. |
- |
. |
ID=Dca25226.1.exon2;Parent=Dca25226.1 |
