Carnation DB

Dca25229.1

Annotation

5-exons
f-1
sp|A5AL35_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_032464#GO:0003676;GO:0008270;GO:0015074#2F1P0C
sp|Q6L4J8_SOLDE#Putative polyprotein#Solanum demissum (Wild potato)#Name=PGEC219.6#GO:0003676;GO:0015074#1F1P0C
Repeat List (scaffold2501)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25229.1	9	351	630	20.31	343	32	4e-43
Target_name	Start	End	Length	Cov(%)
sp\|A5AL35_VITVI	14	397	685	56.05

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25229.1	14	127	630	7.46	114	31	8e-12
Target_name	Start	End	Length	Cov(%)
AT1G21280.1	16	171	237	65.82

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2501	Augustus	mRNA	34112	40470	.	+	.	ID=Dca25229.1;Parent=Dca25229
scaffold2501	Augustus	exon	34112	34394	.	+	.	ID=Dca25229.1.exon1;Parent=Dca25229.1
scaffold2501	Augustus	exon	34518	34616	.	+	.	ID=Dca25229.1.exon2;Parent=Dca25229.1
scaffold2501	Augustus	exon	34734	35403	.	+	.	ID=Dca25229.1.exon3;Parent=Dca25229.1
scaffold2501	Augustus	exon	37518	38130	.	+	.	ID=Dca25229.1.exon4;Parent=Dca25229.1
scaffold2501	Augustus	exon	40243	40470	.	+	.	ID=Dca25229.1.exon5;Parent=Dca25229.1