Dca25270.1
Annotation
- 4-exons
- f-1
- sp|A5BAR5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_005608#unknown#0F0P0C
- AT3G55140.1 | Symbols: | Pectin lyase-like superfamily protein | chr3:20438819-20440225 FORWARD LENGTH=331
- Repeat List (scaffold25065)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca25270.1 |
4 |
308 |
320 |
71.25 |
305 |
75 |
8e-129
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5BAR5_VITVI |
11 |
304 |
422 |
69.66 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca25270.1 |
49 |
302 |
320 |
61.25 |
254 |
78 |
4e-119
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G55140.1 |
1 |
254 |
331 |
76.73 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold25065 |
Augustus |
mRNA |
3956 |
6149 |
. |
+ |
. |
ID=Dca25270.1;Parent=Dca25270 |
| scaffold25065 |
Augustus |
exon |
3956 |
4226 |
. |
+ |
. |
ID=Dca25270.1.exon1;Parent=Dca25270.1 |
| scaffold25065 |
Augustus |
exon |
4921 |
5272 |
. |
+ |
. |
ID=Dca25270.1.exon2;Parent=Dca25270.1 |
| scaffold25065 |
Augustus |
exon |
5708 |
5918 |
. |
+ |
. |
ID=Dca25270.1.exon3;Parent=Dca25270.1 |
| scaffold25065 |
Augustus |
exon |
6022 |
6149 |
. |
+ |
. |
ID=Dca25270.1.exon4;Parent=Dca25270.1 |
