Dca25272.1
Annotation
- 3-exons
- f-1
- sp|Q5R1J2_ORYSJ#Integrase core domain, putative#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os11g18580#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold2507)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca25272.1 |
1 |
486 |
498 |
59.23 |
486 |
57 |
4e-159
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q5R1J2_ORYSJ |
575 |
1086 |
1184 |
43.24 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca25272.1 |
1 |
113 |
498 |
7.63 |
113 |
32 |
7e-14
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
657 |
772 |
1428 |
8.12 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold2507 |
Augustus |
mRNA |
18360 |
20225 |
. |
- |
. |
ID=Dca25272.1;Parent=Dca25272 |
| scaffold2507 |
Augustus |
exon |
18360 |
19307 |
. |
- |
. |
ID=Dca25272.1.exon1;Parent=Dca25272.1 |
| scaffold2507 |
Augustus |
exon |
19545 |
19753 |
. |
- |
. |
ID=Dca25272.1.exon2;Parent=Dca25272.1 |
| scaffold2507 |
Augustus |
exon |
19886 |
20225 |
. |
- |
. |
ID=Dca25272.1.exon3;Parent=Dca25272.1 |
