Dca25308.1
Annotation
- 4-exons
- f-1
- sp|D1GEE0_BRARP#Disease resistance protein#Brassica rapa subsp pekinensis (Chinese cabbage) (Brassica pekinensis)#unknown#GO:0043531;GO:0005524;GO:0004672;GO:0006952#3F1P0C
- Repeat List (scaffold251)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca25308.1 |
12 |
308 |
548 |
19.16 |
297 |
35 |
3e-36
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D1GEE0_BRARP |
181 |
468 |
882 |
32.65 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca25308.1 |
12 |
303 |
548 |
20.07 |
292 |
31 |
2e-34
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G46530.1 |
187 |
527 |
835 |
40.83 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold251 |
Augustus |
mRNA |
175267 |
177845 |
. |
+ |
. |
ID=Dca25308.1;Parent=Dca25308 |
| scaffold251 |
Augustus |
exon |
175267 |
175859 |
. |
+ |
. |
ID=Dca25308.1.exon1;Parent=Dca25308.1 |
| scaffold251 |
Augustus |
exon |
176032 |
176352 |
. |
+ |
. |
ID=Dca25308.1.exon2;Parent=Dca25308.1 |
| scaffold251 |
Augustus |
exon |
177039 |
177235 |
. |
+ |
. |
ID=Dca25308.1.exon3;Parent=Dca25308.1 |
| scaffold251 |
Augustus |
exon |
177310 |
177845 |
. |
+ |
. |
ID=Dca25308.1.exon4;Parent=Dca25308.1 |
