Carnation DB

Dca25329.1

Annotation

7-exons
f-1
sp|B9HE16_POPTR#Amino acid permease#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_819531#GO:0016021#0F0P1C
Repeat List (scaffold2513)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25329.1	27	482	483	63.56	456	68	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HE16_POPTR	47	503	504	90.67

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25329.1	26	482	483	59.42	457	63	3e-174
Target_name	Start	End	Length	Cov(%)
Os06t0556000-01	32	486	488	93.23

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2513	Augus-PASA	mRNA	2360	5085	.	+	.	ID=Dca25329.1;Parent=Dca25329
scaffold2513	Augus-PASA	exon	2360	2471	.	+	.	ID=Dca25329.1.exon1;Parent=Dca25329.1
scaffold2513	Augus-PASA	exon	2882	3115	.	+	.	ID=Dca25329.1.exon2;Parent=Dca25329.1
scaffold2513	Augus-PASA	exon	3630	3723	.	+	.	ID=Dca25329.1.exon3;Parent=Dca25329.1
scaffold2513	Augus-PASA	exon	3805	4022	.	+	.	ID=Dca25329.1.exon4;Parent=Dca25329.1
scaffold2513	Augus-PASA	exon	4116	4255	.	+	.	ID=Dca25329.1.exon5;Parent=Dca25329.1
scaffold2513	Augus-PASA	exon	4335	4562	.	+	.	ID=Dca25329.1.exon6;Parent=Dca25329.1
scaffold2513	Augus-PASA	exon	4660	5085	.	+	.	ID=Dca25329.1.exon7;Parent=Dca25329.1