Dca25337.1
Annotation
- 2-exons
- f-2
- sp|D3IVT9_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold25136)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca25337.1 |
1 |
269 |
275 |
54.54 |
269 |
56 |
2e-79
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVT9_9POAL |
673 |
937 |
1313 |
20.18 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca25337.1 |
5 |
73 |
275 |
12 |
69 |
47 |
1e-10
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
647 |
717 |
1428 |
4.97 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold25136 |
Augustus |
mRNA |
561 |
1538 |
. |
+ |
. |
ID=Dca25337.1;Parent=Dca25337 |
| scaffold25136 |
Augustus |
exon |
561 |
731 |
. |
+ |
. |
ID=Dca25337.1.exon1;Parent=Dca25337.1 |
| scaffold25136 |
Augustus |
exon |
881 |
1538 |
. |
+ |
. |
ID=Dca25337.1.exon2;Parent=Dca25337.1 |
