Carnation DB

Dca25339.1

Annotation

5-exons
f-1
sp|E0CSG5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_19s0014g02250#unknown#0F0P0C
sp|B9RBA9_RICCO#Fad NAD binding oxidoreductases, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1673770#unknown#0F0P0C
Repeat List (scaffold2514)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25339.1	1	113	197	37.56	113	66	5e-41
Target_name	Start	End	Length	Cov(%)
sp\|E0CSG5_VITVI	1	113	127	88.97

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25339.1	1	109	197	36.04	109	66	2e-39
Target_name	Start	End	Length	Cov(%)
AT5G53940.1	1	109	129	84.49

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2514	Augus-PASA	mRNA	33880	37724	.	+	.	ID=Dca25339.1;Parent=Dca25339
scaffold2514	Augus-PASA	exon	33880	33975	.	+	.	ID=Dca25339.1.exon1;Parent=Dca25339.1
scaffold2514	Augus-PASA	exon	36116	36159	.	+	.	ID=Dca25339.1.exon2;Parent=Dca25339.1
scaffold2514	Augus-PASA	exon	36542	36650	.	+	.	ID=Dca25339.1.exon3;Parent=Dca25339.1
scaffold2514	Augus-PASA	exon	37271	37326	.	+	.	ID=Dca25339.1.exon4;Parent=Dca25339.1
scaffold2514	Augustus	exon	37436	37724	.	+	.	ID=Dca25339.1.exon5;Parent=Dca25339.1