Carnation DB

Dca25351.1

Annotation

7-exons
f-1
sp|D7TLV0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_13s0019g01060#GO:0003676;GO:0000166#2F0P0C
Os02t0252100-02 Similar to SC35-like splicing factor SCL30, 30 kD.
Repeat List (scaffold2516)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25351.1	1	252	286	50.34	252	57	8e-56
Target_name	Start	End	Length	Cov(%)
sp\|D7TLV0_VITVI	78	304	353	64.3

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25351.1	1	271	286	52.79	271	54	1e-53
Target_name	Start	End	Length	Cov(%)
Os02t0252100-02	1	244	266	91.72

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2516	Augus-PASA	mRNA	11682	15152	.	-	.	ID=Dca25351.1;Parent=Dca25351
scaffold2516	Augus-PASA	exon	11682	11784	.	-	.	ID=Dca25351.1.exon1;Parent=Dca25351.1
scaffold2516	Augus-PASA	exon	12171	12329	.	-	.	ID=Dca25351.1.exon2;Parent=Dca25351.1
scaffold2516	Augus-PASA	exon	12415	12493	.	-	.	ID=Dca25351.1.exon3;Parent=Dca25351.1
scaffold2516	Augus-PASA	exon	13118	13161	.	-	.	ID=Dca25351.1.exon4;Parent=Dca25351.1
scaffold2516	Augus-PASA	exon	13284	13448	.	-	.	ID=Dca25351.1.exon5;Parent=Dca25351.1
scaffold2516	Augus-PASA	exon	14743	14820	.	-	.	ID=Dca25351.1.exon6;Parent=Dca25351.1
scaffold2516	Augustus	exon	14920	15152	.	-	.	ID=Dca25351.1.exon7;Parent=Dca25351.1