Dca25379.1
Annotation
- 3-exons
- f-2116
- sp|A5C9K3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_014781#unknown#0F0P0C
- Os11t0656500-01 Integrase, catalytic core domain containing protein.
- Repeat List (scaffold252)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca25379.1 |
1 |
205 |
548 |
16.42 |
205 |
41 |
8e-27
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5F8_BETVU |
140 |
353 |
1516 |
14.11 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca25379.1 |
1 |
230 |
239 |
44.76 |
230 |
47 |
8e-51
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1157 |
1387 |
1401 |
16.48 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold252 |
Augustus |
mRNA |
57587 |
64590 |
. |
+ |
. |
ID=Dca25379.1;Parent=Dca25379 |
| scaffold252 |
Augustus |
exon |
57587 |
59231 |
. |
+ |
. |
ID=Dca25379.1.exon1;Parent=Dca25379.1 |
| scaffold252 |
Augustus |
exon |
60786 |
61229 |
. |
+ |
. |
ID=Dca25379.1.exon2;Parent=Dca25379.1 |
| scaffold252 |
Augustus |
exon |
63845 |
64590 |
. |
+ |
. |
ID=Dca25379.1.exon3;Parent=Dca25379.1 |
