Carnation DB

Dca25391.1

Annotation

5-exons
f-1
sp|A9P8U3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_734872#GO:0005509#1F0P0C
Os11t0140600-01 EF-Hand type domain containing protein.
Repeat List (scaffold252)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25391.1	33	332	332	58.73	300	64	1e-91
Target_name	Start	End	Length	Cov(%)
sp\|A9P8U3_POPTR	28	307	307	91.2

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25391.1	49	332	332	55.42	284	64	2e-90
Target_name	Start	End	Length	Cov(%)
Os11t0140600-01	32	308	309	89.64

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold252	Augus-PASA	mRNA	164572	168337	.	+	.	ID=Dca25391.1;Parent=Dca25391
scaffold252	Augus-PASA	exon	164572	165223	.	+	.	ID=Dca25391.1.exon1;Parent=Dca25391.1
scaffold252	Augus-PASA	exon	166812	166858	.	+	.	ID=Dca25391.1.exon2;Parent=Dca25391.1
scaffold252	Augus-PASA	exon	166956	167131	.	+	.	ID=Dca25391.1.exon3;Parent=Dca25391.1
scaffold252	Augus-PASA	exon	167237	167255	.	+	.	ID=Dca25391.1.exon4;Parent=Dca25391.1
scaffold252	Augus-PASA	exon	168233	168337	.	+	.	ID=Dca25391.1.exon5;Parent=Dca25391.1