Carnation DB

Dca25400.1

Annotation

5-exons
f-1
sp|B5U9F7_SOYBN#Gag-protease-integrase-RT-RNaseH polyprotein#Glycine max (Soybean) (Glycine hispida)#unknown#GO:0003676;GO:0008233;GO:0008270;GO:0015074;GO:0006508#3F2P0C
Repeat List (scaffold2520)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25400.1	223	691	696	42.24	469	58	1e-161
Target_name	Start	End	Length	Cov(%)
sp\|B5U9F7_SOYBN	431	933	1321	38.07

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25400.1	220	696	696	25.14	477	34	3e-71
Target_name	Start	End	Length	Cov(%)
Os11t0656500-01	516	1024	1401	36.33

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2520	Augustus	mRNA	17347	21567	.	-	.	ID=Dca25400.1;Parent=Dca25400
scaffold2520	Augustus	exon	17347	17796	.	-	.	ID=Dca25400.1.exon1;Parent=Dca25400.1
scaffold2520	Augustus	exon	17907	18877	.	-	.	ID=Dca25400.1.exon2;Parent=Dca25400.1
scaffold2520	Augustus	exon	19487	19768	.	-	.	ID=Dca25400.1.exon3;Parent=Dca25400.1
scaffold2520	Augustus	exon	19958	20332	.	-	.	ID=Dca25400.1.exon4;Parent=Dca25400.1
scaffold2520	Augustus	exon	21555	21567	.	-	.	ID=Dca25400.1.exon5;Parent=Dca25400.1