Carnation DB

Dca25401.1

Annotation

7-exons
f-1
sp|F6HDH7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_05s0020g01890#GO:0005524;GO:0004674#2F0P0C
AT1G54610.2 | Symbols: | Protein kinase superfamily protein | chr1:20393962-20396902 REVERSE LENGTH=573
Repeat List (scaffold2520)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25401.1	1	548	557	74.5	548	74	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HDH7_VITVI	1	545	575	94.78

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25401.1	1	557	557	65.52	557	62	0
Target_name	Start	End	Length	Cov(%)
AT1G54610.2	1	569	573	99.3

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2520	Augustus	mRNA	28489	33063	.	+	.	ID=Dca25401.1;Parent=Dca25401
scaffold2520	Augustus	exon	28489	28785	.	+	.	ID=Dca25401.1.exon1;Parent=Dca25401.1
scaffold2520	Augustus	exon	29137	29421	.	+	.	ID=Dca25401.1.exon2;Parent=Dca25401.1
scaffold2520	Augustus	exon	29533	29850	.	+	.	ID=Dca25401.1.exon3;Parent=Dca25401.1
scaffold2520	Augustus	exon	30209	30436	.	+	.	ID=Dca25401.1.exon4;Parent=Dca25401.1
scaffold2520	Augustus	exon	31747	31847	.	+	.	ID=Dca25401.1.exon5;Parent=Dca25401.1
scaffold2520	Augustus	exon	32018	32189	.	+	.	ID=Dca25401.1.exon6;Parent=Dca25401.1
scaffold2520	Augustus	exon	32791	33063	.	+	.	ID=Dca25401.1.exon7;Parent=Dca25401.1