Carnation DB

Dca25417.1

Annotation

5-exons
f-1
sp|B9GL61_POPTR#Inner membrane protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_751211#GO:0016021;GO:0051205#0F1P1C
Repeat List (scaffold2522)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25417.1	1	267	301	49.5	267	45	3e-61
Target_name	Start	End	Length	Cov(%)
sp\|B9GL61_POPTR	1	332	459	72.33

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25417.1	1	267	301	39.2	267	35	3e-43
Target_name	Start	End	Length	Cov(%)
AT5G62050.1	1	324	429	75.52

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2522	Augustus	mRNA	42857	45583	.	+	.	ID=Dca25417.1;Parent=Dca25417
scaffold2522	Augustus	exon	42857	43323	.	+	.	ID=Dca25417.1.exon1;Parent=Dca25417.1
scaffold2522	Augustus	exon	43765	43855	.	+	.	ID=Dca25417.1.exon2;Parent=Dca25417.1
scaffold2522	Augustus	exon	44734	44865	.	+	.	ID=Dca25417.1.exon3;Parent=Dca25417.1
scaffold2522	Augustus	exon	44947	45054	.	+	.	ID=Dca25417.1.exon4;Parent=Dca25417.1
scaffold2522	Augustus	exon	45476	45583	.	+	.	ID=Dca25417.1.exon5;Parent=Dca25417.1