Carnation DB

Dca25429.1

Annotation

7-exons
f-1
sp|D7TS66_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_05s0051g00440#GO:0016020#0F0P1C
sp|B9GMI0_POPTR#Predicted membrane protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_179024#GO:0016020#0F0P1C
Repeat List (scaffold2523)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25429.1	40	320	322	61.18	281	61	3e-95
Target_name	Start	End	Length	Cov(%)
sp\|D7TS66_VITVI	11	334	354	91.52

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25429.1	28	320	322	55.59	293	54	3e-83
Target_name	Start	End	Length	Cov(%)
AT4G13590.1	6	339	359	93.03

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold2523	Augustus	mRNA	26201	32046	.	-	.	ID=Dca25429.1;Parent=Dca25429
scaffold2523	Augustus	exon	26201	26317	.	-	.	ID=Dca25429.1.exon1;Parent=Dca25429.1
scaffold2523	Augustus	exon	27082	27239	.	-	.	ID=Dca25429.1.exon2;Parent=Dca25429.1
scaffold2523	Augustus	exon	28579	28675	.	-	.	ID=Dca25429.1.exon3;Parent=Dca25429.1
scaffold2523	Augustus	exon	28818	28865	.	-	.	ID=Dca25429.1.exon4;Parent=Dca25429.1
scaffold2523	Augustus	exon	29240	29423	.	-	.	ID=Dca25429.1.exon5;Parent=Dca25429.1
scaffold2523	Augus-PASA	exon	29883	30036	.	-	.	ID=Dca25429.1.exon6;Parent=Dca25429.1
scaffold2523	Augus-PASA	exon	31836	32046	.	-	.	ID=Dca25429.1.exon7;Parent=Dca25429.1