Dca2544.1
Annotation
- 4-exons
- f-2
- sp|G9FIF2_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold10887)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2544.1 |
176 |
502 |
504 |
43.84 |
327 |
68 |
5e-131
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|G9FIF2_BETVU |
1150 |
1476 |
1553 |
21.05 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2544.1 |
176 |
475 |
504 |
21.03 |
300 |
36 |
2e-52
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
1112 |
1410 |
1539 |
19.42 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold10887 |
Augustus |
mRNA |
654 |
6948 |
. |
+ |
. |
ID=Dca2544.1;Parent=Dca2544 |
| scaffold10887 |
Augustus |
exon |
654 |
983 |
. |
+ |
. |
ID=Dca2544.1.exon1;Parent=Dca2544.1 |
| scaffold10887 |
Augustus |
exon |
3988 |
4085 |
. |
+ |
. |
ID=Dca2544.1.exon2;Parent=Dca2544.1 |
| scaffold10887 |
Augustus |
exon |
5399 |
5496 |
. |
+ |
. |
ID=Dca2544.1.exon3;Parent=Dca2544.1 |
| scaffold10887 |
Augustus |
exon |
5959 |
6948 |
. |
+ |
. |
ID=Dca2544.1.exon4;Parent=Dca2544.1 |
