Dca2545.1
Annotation
- 2-exons
- f-1
- sp|D3IVT9_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold10889)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2545.1 |
28 |
123 |
127 |
38.58 |
96 |
52 |
6e-23
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVT9_9POAL |
1216 |
1311 |
1313 |
7.31 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca2545.1 |
51 |
112 |
127 |
20.47 |
62 |
42 |
5e-07
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1323 |
1384 |
1401 |
4.42 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold10889 |
Augustus |
mRNA |
4333 |
7450 |
. |
+ |
. |
ID=Dca2545.1;Parent=Dca2545 |
| scaffold10889 |
Augustus |
exon |
4333 |
4447 |
. |
+ |
. |
ID=Dca2545.1.exon1;Parent=Dca2545.1 |
| scaffold10889 |
Augustus |
exon |
7182 |
7450 |
. |
+ |
. |
ID=Dca2545.1.exon2;Parent=Dca2545.1 |
