Carnation DB

Dca25482.1

Annotation

7-exons
f-1
sp|B9T4I5_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_0001380#unknown#0F0P0C
AT3G48670.1 | Symbols: IDN2, RDM12 | XH/XS domain-containing protein | chr3:18031240-18033615 FORWARD LENGTH=647
Repeat List (scaffold253)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25482.1	3	625	630	60.95	623	62	0
Target_name	Start	End	Length	Cov(%)
sp\|B9T4I5_RICCO	7	620	640	95.93

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25482.1	16	601	630	50.79	586	55	4e-179
Target_name	Start	End	Length	Cov(%)
AT3G48670.1	21	609	647	91.03

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold253	Augus-PASA	mRNA	87216	90945	.	-	.	ID=Dca25482.1;Parent=Dca25482
scaffold253	Augus-PASA	exon	87216	87306	.	-	.	ID=Dca25482.1.exon1;Parent=Dca25482.1
scaffold253	Augustus	exon	87731	87849	.	-	.	ID=Dca25482.1.exon2;Parent=Dca25482.1
scaffold253	Augus-PASA	exon	88520	88729	.	-	.	ID=Dca25482.1.exon3;Parent=Dca25482.1
scaffold253	Augus-PASA	exon	88838	89125	.	-	.	ID=Dca25482.1.exon4;Parent=Dca25482.1
scaffold253	Augus-PASA	exon	89392	89481	.	-	.	ID=Dca25482.1.exon5;Parent=Dca25482.1
scaffold253	Augus-PASA	exon	89699	89880	.	-	.	ID=Dca25482.1.exon6;Parent=Dca25482.1
scaffold253	Augus-PASA	exon	90033	90945	.	-	.	ID=Dca25482.1.exon7;Parent=Dca25482.1