Carnation DB

Dca25487.1

Annotation

7-exons
f-1
sp|D7TLV0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_13s0019g01060#GO:0003676;GO:0000166#2F0P0C
Os12t0572400-01 Similar to SC35-like splicing factor SCL30, 30 kD.
Repeat List (scaffold253)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25487.1	1	263	293	53.24	263	58	3e-57
Target_name	Start	End	Length	Cov(%)
sp\|D7TLV0_VITVI	78	321	353	69.12

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25487.1	1	292	293	56.31	292	56	2e-50
Target_name	Start	End	Length	Cov(%)
Os12t0572400-01	1	262	264	99.24

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold253	Augus-PASA	mRNA	130366	132877	.	-	.	ID=Dca25487.1;Parent=Dca25487
scaffold253	Augus-PASA	exon	130366	130486	.	-	.	ID=Dca25487.1.exon1;Parent=Dca25487.1
scaffold253	Augus-PASA	exon	130711	130878	.	-	.	ID=Dca25487.1.exon2;Parent=Dca25487.1
scaffold253	Augus-PASA	exon	130999	131077	.	-	.	ID=Dca25487.1.exon3;Parent=Dca25487.1
scaffold253	Augus-PASA	exon	131359	131399	.	-	.	ID=Dca25487.1.exon4;Parent=Dca25487.1
scaffold253	Augus-PASA	exon	131500	131664	.	-	.	ID=Dca25487.1.exon5;Parent=Dca25487.1
scaffold253	Augus-PASA	exon	132309	132386	.	-	.	ID=Dca25487.1.exon6;Parent=Dca25487.1
scaffold253	Augustus	exon	132648	132877	.	-	.	ID=Dca25487.1.exon7;Parent=Dca25487.1