Carnation DB

Dca25488.1

Annotation

10-exons
f-1
sp|D7TLU9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_13s0019g01070#GO:0005737;GO:0051536;GO:0008173;GO:0006364#2F1P1C
sp|B9T4I0_RICCO#Catalytic, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0000920#GO:0005737;GO:0051536;GO:0008173;GO:0006364#2F1P1C
Repeat List (scaffold253)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25488.1	66	443	443	65.01	378	77	6e-177
Target_name	Start	End	Length	Cov(%)
sp\|D7TLU9_VITVI	33	407	407	92.13

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25488.1	60	443	443	66.13	384	76	2e-169
Target_name	Start	End	Length	Cov(%)
AT2G39670.2	46	431	431	89.55

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold253	Augustus	mRNA	135239	138892	.	-	.	ID=Dca25488.1;Parent=Dca25488
scaffold253	Augustus	exon	135239	135421	.	-	.	ID=Dca25488.1.exon1;Parent=Dca25488.1
scaffold253	Augustus	exon	135676	135812	.	-	.	ID=Dca25488.1.exon2;Parent=Dca25488.1
scaffold253	Augus-PASA	exon	135898	136037	.	-	.	ID=Dca25488.1.exon3;Parent=Dca25488.1
scaffold253	Augus-PASA	exon	136289	136392	.	-	.	ID=Dca25488.1.exon4;Parent=Dca25488.1
scaffold253	Augus-PASA	exon	136594	136710	.	-	.	ID=Dca25488.1.exon5;Parent=Dca25488.1
scaffold253	Augus-PASA	exon	136859	136945	.	-	.	ID=Dca25488.1.exon6;Parent=Dca25488.1
scaffold253	Augus-PASA	exon	137047	137148	.	-	.	ID=Dca25488.1.exon7;Parent=Dca25488.1
scaffold253	Augus-PASA	exon	137590	137687	.	-	.	ID=Dca25488.1.exon8;Parent=Dca25488.1
scaffold253	Augustus	exon	138391	138466	.	-	.	ID=Dca25488.1.exon9;Parent=Dca25488.1
scaffold253	Augustus	exon	138605	138892	.	-	.	ID=Dca25488.1.exon10;Parent=Dca25488.1