Carnation DB

Dca25489.1

Annotation

6-exons
f-1
sp|B9HPH0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_768202#GO:0005524;GO:0004674#2F0P0C
Os03t0821900-02 Similar to Protein kinase APK1B.
Repeat List (scaffold253)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25489.1	27	321	327	50.76	295	50	3e-81
Target_name	Start	End	Length	Cov(%)
sp\|B9HPH0_POPTR	13	347	391	85.67

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca25489.1	27	321	327	51.37	295	50	3e-82
Target_name	Start	End	Length	Cov(%)
Os03t0821900-02	5	343	403	84.11

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold253	Augustus	mRNA	139981	143542	.	-	.	ID=Dca25489.1;Parent=Dca25489
scaffold253	Augustus	exon	139981	140300	.	-	.	ID=Dca25489.1.exon1;Parent=Dca25489.1
scaffold253	Augustus	exon	140703	140829	.	-	.	ID=Dca25489.1.exon2;Parent=Dca25489.1
scaffold253	Augustus	exon	140917	141059	.	-	.	ID=Dca25489.1.exon3;Parent=Dca25489.1
scaffold253	Augustus	exon	141217	141303	.	-	.	ID=Dca25489.1.exon4;Parent=Dca25489.1
scaffold253	Augustus	exon	141674	141886	.	-	.	ID=Dca25489.1.exon5;Parent=Dca25489.1
scaffold253	Augustus	exon	143449	143542	.	-	.	ID=Dca25489.1.exon6;Parent=Dca25489.1